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HackCovid-Leman<br>
<big>'''HackCovid-Leman''</big>'<br>
date: Saturday 28 March 2020<br>
'''date:''' Saturday 28 March 2020<br>
where: ONLINE from 9AM --> https://tinyurl.com/hackcovid Zoom:957 309 096<br>
'''where:''' ONLINE from 10AM --> https://tinyurl.com/hackcovid Zoom:957 309 096<br>
from 10AM to 5PM HACKATHON<br>
'''from:''' 10AM to 5PM HACKATHON<br>
register here if you haven't: https://www.eventbrite.com/e/hackcovid-leman-tickets-94729014031<br>
'''register:''' here if you haven't: https://www.eventbrite.com/e/hackcovid-leman-tickets-94729014031<br>
'''whatsapp group''' https://tinyurl.com/hackcovid-whatsapp
''Everybody can contribute by editing the document.<br>
''Everybody can contribute by editing the document.<br>
'''Spanish''' https://docs.google.com/forms/d/e/1FAIpQLSc-S9PuJyBLsBipvZdqeVBKC6rH-MdxGWbfUqO1tEkfaXhUiA/viewform?usp=pp_url<br>
'''Spanish''' https://docs.google.com/forms/d/e/1FAIpQLSc-S9PuJyBLsBipvZdqeVBKC6rH-MdxGWbfUqO1tEkfaXhUiA/viewform?usp=pp_url<br>
'''German''' https://docs.google.com/forms/d/e/1FAIpQLSernWpiNwYz-s9kUrUtsfXo1YJU4tvlmDtvuA1YjERt3JH7Ug/viewform?usp=pp_url<br>
'''Italian''' https://docs.google.com/forms/d/e/1FAIpQLSd8gqx6JtUKZGi2dnBdDUqDlhvBb1n9xOnXRCYC9ob21Sv_DA/viewform<br>
==Goals==
==Goals==
'''1.Introduction''' by [[Paul-Olivier Dehaye]]<br>
'''1.Introduction''' by [[Paul-Olivier Dehaye]]<br>
[https://tinyurl.com/hackCOVID-slides POD Presentation]
[https://tinyurl.com/COVID-Miles YT video Anthropology of SARSCoV and Research into SARS CoV2 COVID19 HCoV19]
Oxford article [[Item:Q4160| '':Quantifying dynamics of SARS-CoV-2 transmission suggests that epidemic control and avoidance is feasible through instantaneous digital contact tracing '']]
'''2.SHORT TALKS'''
'''2.SHORT TALKS'''
* biological aspect: understanding the virus
* biological aspect: understanding the virus
* why tracing?
* sociological aspect: explain the context population, authorities, public health, why work on this? how to count those who do not have voices without data? seek data minimization, what is the social meaning of monitoring, on what scale? (Miles and Jessica)
* sociological aspect: explain the context population, authorities, public health, why work on this? how to count those who do not have voices without data? seek data minimization, what is the social meaning of monitoring, on what scale? (Miles and Jessica)
* technical aspect: understanding transparency in existing solutions (Lennig) legality in relation to proportionality (PO) global vs. local context, how to prove that tracing is necessary?
* technical aspect: understanding transparency in existing solutions (Lennig) legality in relation to proportionality (PO) global vs. local context, how to prove that tracing is necessary?
* our initiative stemming from MyData (PO): trusted intermediaries, informed consent
* our initiative stemming from [https://mydata-global.org/covid19-mydata-commons MyData] (PO): governance, trusted intermediaries, informed consent, COVID-19 MyData Commons
'''3. Presentation of groups so everyone can make a choice where to participate.'''
'''3. Presentation of groups so everyone can make a choice where to participate.'''
* comments, questions, new ideas
* comments, questions, new ideas
'''4. Group formation in Zoom according to the number of group 1-6'''
'''4. Group formation in Zoom according to the number of group 1-6'''
'''5.
'''5.
'''5. Break (12.30pm-2pm)
'''6. Conclusions
'''7. Celebrations Apero
'''6. Quick sync (2pm-2.30pm)
'''8. Post Hackcovit
'''7. Second round of group work (2.30pm-4pm)
'''7. Conclusions (4pm-5pm)
'''8. Celebrations Apero
'''9. Post HackCovid. Follow up
<br>
<br>
== Working groups ==
You can access the form to submit challenges for that Swiss hackathon here:
https://docs.google.com/forms/d/e/1FAIpQLSfLYrHhlUdhJ_PoECAeYZazTd_zGa3KqE3TrItOWZhLnEC02A/viewform
<br>
<br>
'''[[Events/HackCovid/2020-03-28/Group1|Group 1]]: Legal'''
'''[[Events/HackCovid/2020-03-28/Group1|Group 1]]: Data protection .Proportionality?''' <br>
informed consent
Participants: [[Paul-Olivier Dehaye]], Jean Rossiaud, John W ...<br>
working document:https://tinyurl.com/hackcovid-group1<br>
informed consent<br>
data protection<br>
data protection<br>
privacy<br>
privacy<br>
balancing tests<br>
balancing tests<br>
'''[[Events/HackCovid/2020-03-28/Group2|Group 2]]: data collection'''<br>
'''[[Events/HackCovid/2020-03-28/Group2|Group 2]]: Data collection- Prototyping'''<br>
crowdsourcing
Participants: Iain Henderson, Gianfranco, ..<br>
'''technical angle'''
JNLC protocol https://protocol.jlinc.org<br>
crowdsourcing <br>
what data to collect<br>
what data to collect<br>
how much to collect<br>
how much to collect<br>
tools, scripts for automatic collection<br>
tools, scripts for automatic collection<br>
see: Crowdsourced data collection: what to get? <br>
see: Crowdsourced data collection: what to get? <br>
''Proposal for next Hackathon VersusVirus([http://www.versusvirus.ch www.versusvirus.ch]) for group 2''
''Prepopulate the Common using Data Excellence Management Systems and AI with existing DEMS toolset. The goal is to have fast and widespread adoption of the JLINC <br>
''''Protocol for Data Sharing to build the Common with'' <br>
''minimal effort:''<br>
''- Data access'' <br>
''- Data harmonization'' <br>
''- Data Protection''<br>''''
''https://www.globaldataexcellence.com/verbatim/'' <br>
'''[[Events/HackCovid/2020-03-28/Group3|Group 3]]: data anthropology'''<br>
'''[[Events/HackCovid/2020-03-28/Group3|Group 3]]: Data anthropology and ethics'''<br>
13 participants:Michele, Jessica, Genferei, Alex, Winfried, Rémi, Judith D, Judith H, Isabelle, Christian, Maurizio Arseni, Jean-Henri Morin, Luca<br>
'''Summary of the full day available here --->''' [[Events/HackCovid/2020-03-28/Group3|Group 3]]<br>
state of the art: epidemiology, social sciences, data science<br>
state of the art: epidemiology, social sciences, data science<br>
how are communities, and social networks built<br>
how are communities, and social networks built<br>
what are the solutions for people without internet, devices, that do not want to track? what are the benefits of those type of persons for the whole community in terms of privacy, infrastructure costs...?
what are the solutions for people without internet, devices, that do not want to track? what are the benefits of those type of persons for the whole community in terms of privacy, infrastructure costs...?
'''[[Events/HackCovid/2020-03-28/Group4|Group 4]]: tech savvy'''<br>
'''[[Events/HackCovid/2020-03-28/Group4|Group 4]]: app audit'''<br>
apps
Participants:Lenning, Paul Wang, Simon <br>
security
'''Need the working document!!!'''
infrastructure
apps<br>
security<br>
infrastructure<br>
best solution by design<br>
'''[[Events/HackCovid/2020-03-28/Group5|Group 5]]: ethics'''<br>
'''[[Events/HackCovid/2020-03-28/Group6|Group 5]]: data Viz'''<br>
participants:
==Participants ==
==Participants ==
Our hackathon is dedicated to providing a safe and comfortable environment and harassment-free experience for everyone. We do not tolerate harassment of hackathon participants in any form. Hackathon participants violating these rules may be sanctioned or expelled from the hackathon at the discretion of the hackathon organisers.
Our hackathon is dedicated to providing a safe and comfortable environment and harassment-free experience for everyone. We do not tolerate harassment of hackathon participants in any form. Hackathon participants violating these rules may be sanctioned or expelled from the hackathon at the discretion of the hackathon organisers.
==[[Events/HackCovid/2020-03-28/Resources|Resources]]==
MyData slack with a lot of ressources to filter in the different channels [https://mydataglobal.slack.com/ mydataglobal.slack.com/] #coronadata #coronavalues #coronaneeds #coronainfo<br>
==Documentation==
Our forum: https://forum.personaldata.io/ with different links, apps, databases, scientific articles to browse by topic<br>
To be able to record your efforts please document your work by clicking on every group title. You will find then a new page for you. Here are some main points you can keep in your page:<br>
'''1.Presentation of the project<br>
'''2.Group members<br>
'''3.Objectives<br>
'''4.Results<br>
'''5.Difficulties encountered / limitations<br>
'''6.Perspectives to go further with the project<br>
'''7.Resources<br>
'''
==Resources==
=== Good practices ===
[https://docs.google.com/document/d/1MzjbHEWJOHB8G5cSitIS0mqCN8F9f01wDBVmdaR31yA/edit#heading=h.cjweakkg5f How to set-up an online hackhaton within 6 hours]
===MyData Slack===
MyData slack with a lot of resources to filter in the different channels [https://mydataglobal.slack.com/ mydataglobal.slack.com/] #coronadata #coronavalues #coronaneeds #coronainfo<br>
===Forum===
Our forum: https://forum.personaldata.io/c/hackcovid/ or https://forum.personaldata.io/c/coronadata with different links, apps, databases, scientific articles to browse by topic<br>
===Zurich Hackhathon===
Select Data and resource at the top (constantly supplemented) https://www.codevscovid19.org/
=== COVID-19 App===
App List https://trello.com/b/uKXApmGN/mydata-global-covid-19-app-list<br>
[https://query.personaldata.io/index.html#PREFIX%20pdio%3A%20%3Chttps%3A%2F%2Fwiki.personaldata.io%2Fentity%2F%3E%0APREFIX%20pdiot%3A%20%3Chttps%3A%2F%2Fwiki.personaldata.io%2Fprop%2Fdirect%2F%3E%0APREFIX%20pdiop%3A%20%3Chttps%3A%2F%2Fwiki.personaldata.io%2Fprop%2F%3E%0APREFIX%20pdiops%3A%20%3Chttps%3A%2F%2Fwiki.personaldata.io%2Fprop%2Fstatement%2F%3E%0APREFIX%20pdiopq%3A%20%3Chttps%3A%2F%2Fwiki.personaldata.io%2Fprop%2Fqualifier%2F%3E%0A%0ASELECT%20%3Fitem%20%3FitemLabel%20%20%3FcountryLabel%20%3FquoteLabel%20%3Fweb%20WHERE%20%7B%0A%20%20%3Fitem%20pdiot%3AP110%20pdio%3AQ4138.%23coronada%0A%20%20%3Fitem%20pdiot%3AP3%20pdio%3AQ438.%20%20%23mobile%20app%0A%20%20OPTIONAL%20%7B%3Fitem%20pdiot%3AP55%20%3Fcountry%7D%0A%20%20OPTIONAL%20%7B%3Fitem%20pdiot%3AP15%20%3Fweb%7D%0A%20%20%0A%20%20SERVICE%20wikibase%3Alabel%20%7B%0A%20%20%20%20bd%3AserviceParam%20wikibase%3Alanguage%20%22en%22%20.%20%0A%20%20%7D%0A%20%20%0A%7D%0A%0AORDER%20BY%20DESC%28UCASE%28str%28%3FitemLabel%29%29%29 App list available on the wiki]
<br>
=== Data repository ===
[https://query.personaldata.io/index.html#PREFIX%20pdio%3A%20%3Chttps%3A%2F%2Fwiki.personaldata.io%2Fentity%2F%3E%0APREFIX%20pdiot%3A%20%3Chttps%3A%2F%2Fwiki.personaldata.io%2Fprop%2Fdirect%2F%3E%0APREFIX%20pdiop%3A%20%3Chttps%3A%2F%2Fwiki.personaldata.io%2Fprop%2F%3E%0APREFIX%20pdiops%3A%20%3Chttps%3A%2F%2Fwiki.personaldata.io%2Fprop%2Fstatement%2F%3E%0APREFIX%20pdiopq%3A%20%3Chttps%3A%2F%2Fwiki.personaldata.io%2Fprop%2Fqualifier%2F%3E%0A%0ASELECT%20%3Fitem%20%3FitemLabel%20%20%3FcountryLabel%20%3FquoteLabel%20%3Fweb%20WHERE%20%7B%0A%20%20%3Fitem%20pdiot%3AP110%20pdio%3AQ4138.%23coronada%0A%20%20%3Fitem%20pdiot%3AP3%20pdio%3AQ144.%0A%20%20OPTIONAL%20%7B%3Fitem%20pdiot%3AP55%20%3Fcountry%7D%0A%20%20OPTIONAL%20%7B%3Fitem%20pdiot%3AP15%20%3Fweb%7D%0A%20%20%0A%20%20SERVICE%20wikibase%3Alabel%20%7B%0A%20%20%20%20bd%3AserviceParam%20wikibase%3Alanguage%20%22en%22%20.%20%0A%20%20%7D%0A%20%20%0A%7D%0A%0AORDER%20BY%20DESC%28UCASE%28str%28%3FitemLabel%29%29%29 Non exhaustive data repository available on the wiki]
=== Press articles ===
[https://query.personaldata.io/index.html#PREFIX%20pdio%3A%20%3Chttps%3A%2F%2Fwiki.personaldata.io%2Fentity%2F%3E%0APREFIX%20pdiot%3A%20%3Chttps%3A%2F%2Fwiki.personaldata.io%2Fprop%2Fdirect%2F%3E%0APREFIX%20pdiop%3A%20%3Chttps%3A%2F%2Fwiki.personaldata.io%2Fprop%2F%3E%0APREFIX%20pdiops%3A%20%3Chttps%3A%2F%2Fwiki.personaldata.io%2Fprop%2Fstatement%2F%3E%0APREFIX%20pdiopq%3A%20%3Chttps%3A%2F%2Fwiki.personaldata.io%2Fprop%2Fqualifier%2F%3E%0A%0ASELECT%20%3Fitem%20%3FitemLabel%20%3Fdate%20%20%3FcountryLabel%20%3FquoteLabel%20%3Fweb%20WHERE%20%7B%0A%20%20%3Fitem%20pdiot%3AP110%20pdio%3AQ4138.%0A%20%20%3Fitem%20pdiot%3AP3%20pdio%3AQ1206.%20%23news%20item%0A%20%20OPTIONAL%20%7B%3Fitem%20pdiot%3AP55%20%3Fcountry%7D%0A%20%20OPTIONAL%20%7B%3Fitem%20pdiot%3AP203%20%3Fquote%7D%0A%20%20OPTIONAL%20%7B%3Fitem%20pdiot%3AP100%20%3Fdate%7D%0A%20%20OPTIONAL%20%7B%3Fitem%20pdiot%3AP15%20%3Fweb%7D%0A%20%20%20OPTIONAL%20%7B%3Fitem%20pdiot%3AP203%20%3Fquote%7D%0A%20%20SERVICE%20wikibase%3Alabel%20%7B%0A%20%20%20%20bd%3AserviceParam%20wikibase%3Alanguage%20%22en%22%20.%20%0A%20%20%7D%0A%20%20%0A%7D%0A%0AORDER%20BY%20DESC%28UCASE%28str%28%3Fdate%29%29%29 Selected press articles available on the Wiki]
===Scholarly articles ===
[https://query.personaldata.io/index.html#PREFIX%20pdio%3A%20%3Chttps%3A%2F%2Fwiki.personaldata.io%2Fentity%2F%3E%0APREFIX%20pdiot%3A%20%3Chttps%3A%2F%2Fwiki.personaldata.io%2Fprop%2Fdirect%2F%3E%0APREFIX%20pdiop%3A%20%3Chttps%3A%2F%2Fwiki.personaldata.io%2Fprop%2F%3E%0APREFIX%20pdiops%3A%20%3Chttps%3A%2F%2Fwiki.personaldata.io%2Fprop%2Fstatement%2F%3E%0APREFIX%20pdiopq%3A%20%3Chttps%3A%2F%2Fwiki.personaldata.io%2Fprop%2Fqualifier%2F%3E%0A%0ASELECT%20%3Fitem%20%3FitemLabel%20%3Fdate%20%20%20%3Fweb%20WHERE%20%7B%0A%20%20%3Fitem%20pdiot%3AP110%20pdio%3AQ4138.%0A%20%20%3Fitem%20pdiot%3AP3%20pdio%3AQ210.%20%23scholarly%20article%0A%20%20OPTIONAL%20%7B%3Fitem%20pdiot%3AP100%20%3Fdate%7D%0A%20%20OPTIONAL%20%7B%3Fitem%20pdiot%3AP15%20%3Fweb%7D%0A%20%20SERVICE%20wikibase%3Alabel%20%7B%0A%20%20%20%20bd%3AserviceParam%20wikibase%3Alanguage%20%22en%22%20.%20%0A%20%20%7D%0A%20%20%0A%7D%0A%0AORDER%20BY%20DESC%28UCASE%28str%28%3Fdate%29%29%29 Selected scholarly articles available on the Wiki]
=== Health databases ===
=== Data dictionaries for intake of COVID patients ===
* from Geneva Canton, a RedCap dictionary https://www.dropbox.com/s/nfos9rv7iwkyyaz/SuiviCOVID19_DataDictionary_2020-03-22.csv?dl=0 for the intake of COVID-positive patients<br>
* from the UK: COVID self-assessment standards https://ckm.apperta.org/ckm/templates/1051.57.241) and other standards relating to COVID added [here]https://ckm.apperta.org/ck) (website is difficult, please add below what you have)<br>
* from China in openEHR https://discourse.openehr.org/t/covid-19-diagnosis-and-treatment-decision-support-openehr-templates-and-rules/516 <br>
* openEHR standards https://discourse.openehr.org/t/openehr-covid-19-project/448 <br>
=== Questions raised during the main presentation ===
The questions started a rich discussion during the main presentation of the hackathon, please find them in the link below to enrich your work.<br>
https://forum.personaldata.io/t/questions-raised-during-the-main-presentation-of-hackcovid-leman/381<br>